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A Property-Guided Diffusion Model for Generating Molecular Graphs

DOI:
10.60864/5hk1-4v27
Citation Author(s):
Submitted by:
Xiuying Chen
Last updated:
8 April 2024 - 6:02am
Document Type:
Poster
Document Year:
2024
Event:
Presenters:
Changsheng Ma
Categories:
 

Inverse molecular generation is an essential task for drug discovery, and generative models offer a very promising avenue, especially when diffusion models are used. Despite their great success, existing methods are inherently limited by the lack of a semantic latent space that can not be navigated and perform targeted exploration to generate molecules with desired properties.
Here, we present a property-guided diffusion model for generating desired molecules, which incorporates a sophisticated diffusion process capturing intricate interactions of nodes and edges within molecular graphs and leverages a time-dependent molecular property classifier to integrate desired properties into the diffusion sampling process. Furthermore, we extend our model to a multi-property-guided paradigm. Experimental results underscore the competitiveness of our approach in molecular generation, highlighting its superiority in generating desired molecules without the need for additional optimization steps.

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